BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A09SP1|AL427420
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1764 0.0
>3x_Contig1746
Length = 26672
Score = 1764 bits (889), Expect = 0.0
Identities = 919/926 (99%), Gaps = 3/926 (0%)
Strand = Plus / Minus
Query: 18 ccaactcaagatgaatattacacaggatcggggcagnatacaggagaactcggaactcgg 77
||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| |||||
Sbjct: 5266 ccaactcaagatgaatatttcacaggatctgggcagtatacaggagaactcgga-ctcgg 5208
Query: 78 actcgacgctgttgaggccgtcgtacgataccgctgtcaaattattgcaactgtatcgaa 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5207 actcgacgctgttgaggccgtcgtacgataccgctgtcaaattattgcaactgtatcgaa 5148
Query: 138 taagaattcatcgtcagtatccgttcctagattggccatgggtacttgattgtttccaca 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5147 taagaattcatcgtcagtatccgttcctagattggccatgggtacttgattgtttccaca 5088
Query: 198 aagtgttcatgttgaatacgaaggataccaaagcgatttcattcgtctatctcgtgttgt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5087 aagtgttcatgttgaatacgaaggataccaaagcgatttcattcgtctatctcgtgttgt 5028
Query: 258 ctattggtgtcgacttgggagaagttgttgaaggagctcatccttctagtttatactatg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5027 ctattggtgtcgacttgggagaagttgttgaaggagctcatccttctagtttatactatg 4968
Query: 318 ggattacgatggatcacatcaactccacgttagaagcaggaagcatcaggaccattcaac 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4967 ggattacgatggatcacatcaactccacgttagaagcaggaagcatcaggaccattcaac 4908
Query: 378 tatacctactactgatcattcaactgctggtaaaacccaaggagagtttgtcagatgact 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4907 tatacctactactgatcattcaactgctggtaaaacccaaggagagtttgtcagatgact 4848
Query: 438 ataatcagttatggcttcttgcaggagtggccgtacgaacagcggtttcgttagatttac 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4847 ataatcagttatggcttcttgcaggagtggccgtacgaacagcggtttcgttagatttac 4788
Query: 498 acaggaaaccaggatcaccaagaagcatgactcatggcttagaacaacacgttttacaga 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4787 acaggaaaccaggatcaccaagaagcatgactcatggcttagaacaacacgttttacaga 4728
Query: 558 acctaaggtcaagggtattctggtgtgcgtacagcattgaaaggttgattggtatgacag 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4727 acctaaggtcaagggtattctggtgtgcgtacagcattgaaaggttgattggtatgacag 4668
Query: 618 tgggtagaccgttttgcatatccgacgtggatattgatgctcctttaccagaatccgaac 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4667 tgggtagaccgttttgcatatccgacgtggatattgatgctcctttaccagaatccgaac 4608
Query: 678 tagaagtaggatccactttgggatcagcagattgtg-aacgcatatgtatgctaatgcca 736
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4607 tagaagtaggatccactttgggatcagcagattgtgaaacgcatatgtatgctaatgcca 4548
Query: 737 ttgaaattttcaaattaagacgaattcaatcctctatatgtatgttcgtgtatggtccac 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4547 ttgaaattttcaaattaagacgaattcaatcctctatatgtatgttcgtgtatggtccac 4488
Query: 797 gtaagtttctcgataacgacgatgagatcaatcaatcaagacaacagatcatacttgaat 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4487 gtaagtttctcgataacgacgatgagatcaatcaatcaagacaacagatcatacttgaat 4428
Query: 857 tggaagattgg-aacagggattctcttcacaaaaatcgaataaggrcatgaacttcatat 915
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4427 tggaagattggaaacagggattctcttcacaaaaatcgaataaggacatgaacttcatat 4368
Query: 916 caactgacacttgggcaaatatgaat 941
||||||||||||||||||||||||||
Sbjct: 4367 caactgacacttgggcaaatatgaat 4342
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5796
Number of Sequences: 1807
Number of extensions: 5796
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)